dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01649
Location and strand information: 67890 - 71297 (+)
Family: 1.B.14.6.13
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01650
Location and strand information: 71314 - 72927 (+)
Family: 8.A.46.2.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01651
Location and strand information: 72952 - 74028 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01652
Location and strand information: 74037 - 75191 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01653
Location and strand information: 75225 - 76655 (+)
Family: GH18
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.5226
Protein molecular weight: 51835.25
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01654
Location and strand information: 76686 - 78020 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01655
Location and strand information: 78268 - 78702 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01656
Location and strand information: 78894 - 81164 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.6418
Protein molecular weight: 86836.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01657
Location and strand information: 81188 - 83473 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.1743
Protein molecular weight: 86011.48
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01658
Location and strand information: 83505 - 84500 (-)
Family: FecR
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01659
Location and strand information: 84553 - 85107 (-)
Family: GerE
Protein type: TF
Protein description: RNA polymerase sigma factor FliA

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01660
Location and strand information: 85136 - 87367 (-)
Family: GH92
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 4.8281
Protein molecular weight: 84279.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01661
Location and strand information: 87600 - 90218 (-)
Family: null
Protein type: null
Protein description: Alanine--tRNA ligase

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01662
Location and strand information: 90326 - 91294 (+)
Family: 1.A.34.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01663
Location and strand information: 91316 - 91657 (+)
Family: MerR
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01664
Location and strand information: 91659 - 93902 (-)
Family: HD
Protein type: STP
Protein description: Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase

Gene clsuter ID: MGYG000000196_6|CGC3
Gene ID: MGYG000000196_01665
Location and strand information: 93975 - 95270 (-)
Family: GH23|CBM50
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.9526
Protein molecular weight: 48783.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000196_01653	GH18_e42\|3.2.1.96	hostglycan
MGYG000000196_01656	GH92_e8\|3.2.1.113\|3.2.1.-	hostglycan
MGYG000000196_01657	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan
MGYG000000196_01660	GH92_e0\|3.2.1.114\|3.2.1.-	hostglycan
MGYG000000196_01665	GH23_e640\|CBM50_e542

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is host glycan

Substrate predicted by dbCAN-PUL is mucin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000196_01649	hypothetical protein	TC	67890	71297	+	1.B.14.6.13
MGYG000000196_01650	hypothetical protein	TC	71314	72927	+	8.A.46.2.2
MGYG000000196_01651	hypothetical protein	null	72952	74028	+	DUF4849
MGYG000000196_01652	hypothetical protein	null	74037	75191	+	DUF1735\| Laminin_G_3
MGYG000000196_01653	hypothetical protein	CAZyme	75225	76655	+	GH18
MGYG000000196_01654	hypothetical protein	null	76686	78020	+	DUF4989\| F5_F8_type_C
MGYG000000196_01655	hypothetical protein	null	78268	78702	-	DUF6078
MGYG000000196_01656	hypothetical protein	CAZyme	78894	81164	-	GH92
MGYG000000196_01657	hypothetical protein	CAZyme	81188	83473	-	GH92
MGYG000000196_01658	hypothetical protein	STP	83505	84500	-	FecR
MGYG000000196_01659	RNA polymerase sigma factor FliA	TF	84553	85107	-	GerE
MGYG000000196_01660	hypothetical protein	CAZyme	85136	87367	-	GH92
MGYG000000196_01661	Alanine--tRNA ligase	null	87600	90218	-	tRNA-synt_2c\| tRNA_SAD\| DHHA1
MGYG000000196_01662	hypothetical protein	TC	90326	91294	+	1.A.34.1.3
MGYG000000196_01663	hypothetical protein	TF	91316	91657	+	MerR
MGYG000000196_01664	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	STP	91659	93902	-	HD
MGYG000000196_01665	hypothetical protein	CAZyme	93975	95270	-	GH23\| CBM50
Protein ID	Protein Name	Type	Start	End	Strand	Signature